Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805413.1_cds_XP_016493719.1_8381
CDS Infomation

[gene=LOC107813020] [db_xref=GeneID:107813020] [protein=pentatricopeptide repeat-containing protein At3g60050-like] [protein_id=XP_016493719.1] [location=complement(36464..37957)] [gbkey=CDS]
Sequence

ATGTATTCTGTAGCTCTTTTTGGTCAAAGAGTTATTCAGAGATTCTCTTATTTTAGCACC
TTTTCACGGTTTTTATGTAATCGGCAATTTGACACTGATGGCACTGGAAATGGGTTTGGA
AAAATCGAAGATTACTTGAATGAGAGCTGGAAGAGTATGAACTCCGATAATAATATGAAA
GATAAGCCTGATATACAGGAGTCACCTGACTTTATTGGAATCAATGGCTGCTATGAAGGC
GATTTCCAACAAAATTTTAGAAGTCGGCACAACTTTATTGAGAAAGTGAGAAACGAGGCT
TGTATGATTCTTGAAATTCTTCAACAAGATGGTCCAGGATTTGATGCAAAAGAAGCTTTA
GATAATTCACATATTACAGTTTCAAGCCTGCTTGTAAGAGAAGTTCTTCTAGGTATCTTG
AAAATAATAAATTATGCGAATAAAAATAGGTGTGCGAAGCTGGGATACAAGTTCTTTGTA
TGGTCTGGTCAACAAGAAAGTTACCGGCATACGGAAAATTCGTACCATCTGATAATGAAG
ATTTTTGCAGAGTCTGAGGAATTCAAGGCAATGTGGAGATTAGTAGATGAGATGATTGAG
AAAGGATACCCTACAACTGCTAGGACATTTAATTTGTTGATATGTACTTGTGGAGAGGCA
GGTTTGGCTAGAAAAGTAGTAGAGAGGTTTATTAAGTCAAAGACATTCAATTATAGACCA
TTCAAGCATTCATTTAATGCAATTTTACATTCCCTTTTGGGTGTAAATCAGTACAGGTTA
ATTGAGTGGGTGTATCAGCAAATGTTGGTTGAAGGTCATCTTCCTGATATTTTAACTTAT
AACATACTGCTATGCTCAAAATATAGGCTGGGAAAGCTGGATCAATTTCATAGATTGTTA
GATGAAATGGGTCGGAATGGATTTTCACCCGATTTTCATACATTTAACATCCTACTTCAT
GTTCTTGGTAAAGGAGACAAACCGCTAGCAGCACTCAACCTTCTAAACCACATGAAAGAA
GTTGGTTGTGAACCAAGCATTCTGCATTTTACCACTTTGATAGATGGGTTAAGTCGGGCG
AGTAATCTGGATGCATGCAAATACTTCTTTGAAGAGATGGTTAGGCAGGGTTGTGTGCCT
GATGTTGTGTGTTACACTGTTATGATAACAGGATATGTTGTGGCTGGGGAACTTGATAAA
GCACAGGAAATATTTAGTGACATGATCGTCAATGGGCAGTTGCCAAACGTGTTTACTTAC
AATGCCATGATTCGTGGGCTCTGTATGGCTGAGAAATTTGATGATGCATGCATGATGGTG
AAGGAAATGGAATCGAGGGGTTGTAATCCAAATTTTATGGTGTATAGTACTTTAGTCAGT
TACTTGAAAAAAGCTGGAAAGCTGTCCAAAGCTCATGAAGTAATAAGACATATGGTGGAA
AAAGGGCAGTATATCCATCTCGTTCCAAAGTTCAAAAGATATAGAAGATGTTAA

Peptide Sequence

PEP ID

XP_016493719.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Nicotiana tabacum]
Sequence

MYSVALFGQRVIQRFSYFSTFSRFLCNRQFDTDGTGNGFGKIEDYLNESWKSMNSDNNMK
DKPDIQESPDFIGINGCYEGDFQQNFRSRHNFIEKVRNEACMILEILQQDGPGFDAKEAL
DNSHITVSSLLVREVLLGILKIINYANKNRCAKLGYKFFVWSGQQESYRHTENSYHLIMK
IFAESEEFKAMWRLVDEMIEKGYPTTARTFNLLICTCGEAGLARKVVERFIKSKTFNYRP
FKHSFNAILHSLLGVNQYRLIEWVYQQMLVEGHLPDILTYNILLCSKYRLGKLDQFHRLL
DEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMKEVGCEPSILHFTTLIDGLSRA
SNLDACKYFFEEMVRQGCVPDVVCYTVMITGYVVAGELDKAQEIFSDMIVNGQLPNVFTY
NAMIRGLCMAEKFDDACMMVKEMESRGCNPNFMVYSTLVSYLKKAGKLSKAHEVIRHMVE
KGQYIHLVPKFKRYRRC

Transcript Sequence

Gene sequence data has not been registered.